Cooperation

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Cooperation model publications and FAIR criterion assessments
Model citation	Coordination	Code available?	License?	DOI?	Documentation	Clean code
Nowak, M.A., & Sigmund, K. (1998). Evolution of indirect reciprocity by image scoring. Nature, 393(6685), 573-577. https://doi.org/10.1038/31225	nowak-sigmund-1998 In progress	No Code	No License	No DOI	Grade B
Axelrod, R. (1986). An evolutionary approach to norms. American Political Science Review, 80(4), 1095-1111. https://doi.org/10.2307/1960858	axelrod-1986 Not yet started	No Code	No License	No DOI	Grade C
Santos, F.C., & Pacheco, J.M. (2005). Scale-free networks provide a unifying framework for the emergence of cooperation. Physical Review Letters, 95(9), art. no. 098104. https://doi.org/10.1103/PhysRevLett.95.098104	santos-pacheco-2005 Not yet started	No Code	No License	No DOI	Grade C
Nowak, M., & Sigmund, K. (1993). A strategy of win-stay, lose-shift that outperforms tit-for-tat in the Prisoner's Dilemma game. Nature, 364(6432), 56-58. https://doi.org/10.1038/364056a0	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Guimerà, R., Uzzi, B., Spiro, J., & Nunes Amaral, L.A. (2005). Team assembly mechanisms determine collaboration network structure and team performance. Science, 308(5722), 697-702. https://doi.org/10.1126/science.1106340	guimera-etal-2005 Meets FAIR criteria!	Has Code	Licensed	Has DOI	Grade A	Grade A
Choi, J.-K., & Bowles, S. (2007). The coevolution of parochial altruism and war. Science, 318(5850), 636-640. https://doi.org/10.1126/science.1144237	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Hauert, C., Traulsen, A., Brandt, H., Nowak, M.A., & Sigmund, K. (2007). Via freedom to coercion: The emergence of costly punishment. Science, 316(5833), 1905-1907. https://doi.org/10.1126/science.1141588	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Riolo, R.L., Cohen, M.D., & Axelrod, R. (2001). Evolution of cooperation without reciprocity. Nature, 414(6862), 441-443. https://doi.org/10.1038/35106555	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Abramson, G., & Kuperman, M. (2001). Social games in a social network Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics, 63(3), 4. https://doi.org/10.1103/PhysRevE.63.030901	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Zimmermann, M.G., Eguíluz, V.M., & Miguel, M.S. (2004). Coevolution of dynamical states and interactions in dynamic networks. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 69(6 2), art. no. 065102, 065102-1-065102-4. https://doi.org/10.1103/PhysRevE.69.065102	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Leimar, O., & Hammerstein, P. (2001). Evolution of cooperation through indirect reciprocity. Proceedings of the Royal Society B: Biological Sciences, 268(1468), 745-753. https://doi.org/10.1098/rspb.2000.1573	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade D
Santos, F.C., Pacheco, J.M., & Lenaerts, T. (2006). Cooperation prevails when individuals adjust their social ties. PLoS Computational Biology, 2(10), 1284-1291. https://doi.org/10.1371/journal.pcbi.0020140	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Helbing, D., & Yu, W. (2009). The outbreak of cooperation among success-driven individuals under noisy conditions. Proceedings of the National Academy of Sciences of the United States of America, 106(10), 3680-3685. https://doi.org/10.1073/pnas.0811503106	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Macy, M.W., & Flache, A. (2002). Learning dynamics in social dilemmas. Proceedings of the National Academy of Sciences of the United States of America, 99(SUPPL. 3), 7229-7236. https://doi.org/10.1073/pnas.092080099	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Traulsen, A., Claussen, J.C., & Hauert, C. (2005). Coevolutionary dynamics: From finite to infinite populations. Physical Review Letters, 95(23), art. no. 238701. https://doi.org/10.1103/PhysRevLett.95.238701	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Xavier, J.B., & Foster, K.R. (2007). Cooperation and conflict in microbial biofilms. Proceedings of the National Academy of Sciences of the United States of America, 104(3), 876-881. https://doi.org/10.1073/pnas.0607651104	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Szabó, G., & Hauert, C. (2002). Phase transitions and volunteering in spatial public goods games. Physical Review Letters, 89(11), art. no. 118101, 118101/1-118101/4. https://doi.org/10.1103/PhysRevLett.89.118101	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Perc, M., & Wang, Z. (2010). Heterogeneous aspirations promote cooperation in the prisoner's dilemma game. PLoS ONE, 5(12), art. no. e15117. https://doi.org/10.1371/journal.pone.0015117	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Freilich, S., Zarecki, R., Eilam, O., Segal, E.S., Henry, C.S., Kupiec, M., Gophna, U., Sharan, R., & Ruppin, E. (2011). Competitive and cooperative metabolic interactions in bacterial communities. Nature Communications, 2(1), art. no. 589. https://doi.org/10.1038/ncomms1597	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Macy, M.W., & Skvoretz, J. (1998). The evolution of trust and cooperation between strangers: a computational model. American Sociological Review, 63(5), 638-660. https://doi.org/10.2307/2657332	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Santos, F.C., Rodrigues, J.F., & Pacheco, J.M. (2006). Graph topology plays a determinant role in the evolution of cooperation. Proceedings of the Royal Society B: Biological Sciences, 273(1582), 51-55. https://doi.org/10.1098/rspb.2005.3272	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade D
Nakamaru, M., Matsuda, H., & Iwasa, Y. (1997). The evolution of cooperation in a lattice-structured population. Journal of Theoretical Biology, 184(1), 65-81. https://doi.org/10.1006/jtbi.1996.0243	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade B
Hammond, R.A., & Axelrod, R. (2006). The evolution of ethnocentrism. Journal of Conflict Resolution, 50(6), 926-936. https://doi.org/10.1177/0022002706293470	Create Issue (opens in a new tab)	Has Code	No License	No DOI	Grade C	Grade A
Helbing, D., Szolnoki, A., Perc, M., & Szabó, G. (2010). Evolutionary establishment of moral and double moral standards through spatial interactions. PLoS Computational Biology, 6(4). https://doi.org/10.1371/journal.pcbi.1000758	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C
Wang, Z., Szolnoki, A., & Perc, M. (2013). Optimal interdependence between networks for the evolution of cooperation. Scientific Reports, 3, art. no. 2470. https://doi.org/10.1038/srep02470	Create Issue (opens in a new tab)	No Code	No License	No DOI	Grade C

Cooperation on Making Models FAIR

Cooperation